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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888285.1_cds_XP_016442853.1_38073
CDS Infomation

[gene=LOC107768252] [db_xref=GeneID:107768252] [protein=protein CbxX, chromosomal-like] [protein_id=XP_016442853.1] [location=join(23484..23621,29005..29115,29356..29454,29556..29666,29741..30044,30387..30526,30613..31149)] [gbkey=CDS]
Sequence

ATGCAGAGGTCACGAGATCAACGGTCAAGATCCTATAGATCCACAACCATTCACGGATTC
GCTCAATCTGGGGATCTACTTGCCTTTCAAAAGCTTCTTTCCGGAAACCCTTCTCTTCTC
AATGAACGTAACCCAGTTATGGTGCAGACACCACTTCATGTTGCTGCTGGTTACAATAAT
GTTGAAATACTCAAGTTTTTGCTTGGTTGGTCTGGGCCAGAAAAGTTGGAGATGGAAGCC
AAGAATATGTATGGAGAGACCCCATTGCACATGGCAGCAAAGAATGGTAGTAATGAAGCT
GTAAAGATGCTTCTTGCTCATGGTGCTCTCGTTGAAGCGAAAGCAAATAATGGGATGACT
CCATTGCATCTTGCTGTTTGGCACTCTCTACGAGCTGAAGACTGTTCCACGGTCAAGACA
TTGTTAGAGCATGATGCTAATTGTAGTGCCGAAGACAATGAGGGCATGACTCCAATAAAT
CATCTCTCTCAAGGACCTGGTAATGAAAAATTGCGCGAACTTCTCAATTGGCATCTTGAA
GAACAAAGGAAACGTAAAGCTGTTGAAGCATGTGGCCAGACAAAAGCAAAAATGGATGAA
CTTGAAAATGAATTGTCTAAAATAGTGGGCTTACATGAGCTTAAGCAGCAACTCCGGAAA
TGGGCAAAGGGGATGCTCTTGGATGAGAGGCGTCAGGCCCTAGGGCTTAAAGTTGGTGCA
AGAAGACCACCTCATATGGCTTTTCTTGGAAACCCTGGTACAGGGAAAACTATGGTTGCT
AGGATTCTTGGGAAGTTACTTCATATGGTAGGGATTCTTCCAACTGAAAAGGTGACGGAA
GTGCAGAGAACTGATCTGGTTGGTGAATTTGTTGGTCATACAGGACCAAAGACGAGGAGA
AAGATCCAAGAAGCTGAAGGGGGGATTCTTTTTGTTGATGAAGCCTATCGGTTAATACCT
ATGCAGAAGTCAGATGATAAGGATTATGGTTTGGAAGCGCTAGAGGAGATAATGTCTGTC
ATGGACAGTGGAAAAATTGTAGTCATTTTTGCAGGCTATAGCGAACCAATGAAGCGTGTA
ATCTCCTCTAATGAAGGCTTTTGTAGAAGAGTTACGAAGTTCTTTCATTTTGAAAACTTT
AGTTCGAAGGACCTAGCTAAAATTCTTCATCTTAAAATGACTAATCAAGCTGAGAGCAGC
TTGTTATACGGATTTAAGTTGAATCCTTCATGTAGTGTTGATGCTGTTGCAACACTTATC
GGGGAAGAAACCGCTGAAAAGCTGCGCATGGAGATGAATGGAGGTCTAGTGGATCCAATG
CTGGTTAATGCAAGAGAAAATTTGGATTTGAGACTCACTTTTGACTGTATAGACTCGGAT
GAATTACTTACAATCACATTAGAGGATTTAAGAGCTGGTTTGCAATTGCTGTCTCAATGA

Peptide Sequence

PEP ID

XP_016442853.1
PEP Infomation

PREDICTED: protein CbxX, chromosomal-like [Nicotiana tabacum]
Sequence

MQRSRDQRSRSYRSTTIHGFAQSGDLLAFQKLLSGNPSLLNERNPVMVQTPLHVAAGYNN
VEILKFLLGWSGPEKLEMEAKNMYGETPLHMAAKNGSNEAVKMLLAHGALVEAKANNGMT
PLHLAVWHSLRAEDCSTVKTLLEHDANCSAEDNEGMTPINHLSQGPGNEKLRELLNWHLE
EQRKRKAVEACGQTKAKMDELENELSKIVGLHELKQQLRKWAKGMLLDERRQALGLKVGA
RRPPHMAFLGNPGTGKTMVARILGKLLHMVGILPTEKVTEVQRTDLVGEFVGHTGPKTRR
KIQEAEGGILFVDEAYRLIPMQKSDDKDYGLEALEEIMSVMDSGKIVVIFAGYSEPMKRV
ISSNEGFCRRVTKFFHFENFSSKDLAKILHLKMTNQAESSLLYGFKLNPSCSVDAVATLI
GEETAEKLRMEMNGGLVDPMLVNARENLDLRLTFDCIDSDELLTITLEDLRAGLQLLSQ

Transcript Sequence

Gene sequence data has not been registered.